Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919670.1_cds_XP_016468861.1_61455
CDS Infomation

[gene=LOC107791335] [db_xref=GeneID:107791335] [protein=BTB/POZ domain-containing protein POB1-like isoform X3] [protein_id=XP_016468861.1] [location=complement(join(14527..14622,14715..14893,15002..15471,15932..16211,18394..18457,18543..18667,19109..19261,20237..20492))] [gbkey=CDS]
Sequence

ATGAAAAACTTGAACAACGACATTTTTGATCCCCTAACAATAATAATGGACTCCGATTTC
TCTTCTGGTTACGGGTCGGGTACAGAATCCGACTTCGGGTTCGCTTTCAATGACAGCAAT
TTCTCTGACCGGATTTTGATAGTTGAGATCGTTCCAGACTCGCCTGACTCCAAATCCGAC
GGTGAGGGTTGTAGCAGTATCGTTGATTGGGCTCGCAAACGCAAACGTAGGAGAGAAGAA
ATTAAGAAAGAAAATGATGCAGATGTGCTCACGCAACGCGAGGAGGAGATGTTGAATTGT
AATATGCTGGACACAGAAGATGGTCTTGCTTATGAGAACCAAGATGAGGAAGCTGTTGCA
ATGGTTGAGGAATATCCATCCGGCCTCGAGATGATCACAGATCACCCTGGGGATGGTGAA
GCTCCTAAGAGCACTGACTCGTCCACAAACATGGACTCTTCTACTGGGTTTCGAGTTAGA
ACTATACACATCAGTTCTCCTATTTTGGCTGCAAAGAGTCCATTCTTTTATAAGCTGTTC
TCCAACGGCATGAGAGAGTCAGAGCAGCGGCATGTTACTGTACAAATCCATGCCTCGGAA
GAAGCTGCCTTCATGGAGCTATTGAGTTTTATGTATAGCAATGCTTTATCTACGATAACG
CCTACTCCCTTGCTTGACGTGCTTATGGCTGCTGACAAATTTGAGGTTGCATCATGCATG
AGATACTGCAGCCGTTTATTGCGGAATCTTCCCATGACTTGTGAATCAGCCTTGCTTTAT
TTGGATCTTCCTTCTGGCGTTTTAATGGCTGATGCAGTTCTGCCACTGACTGATGCTGCA
AAACAGTTCCTCGCTGCACGTTTCAAGGATATAACCAAGTTCCAAGAAGAGGTGTTGAAC
TTGCCTCTTGCAGGAATTGTGGCTGTTCTCTCCAATGACGATCTTCAGGTTGCTTCAGAG
GATGCTGTATATGACTTTGTGTTAAAATGGGCTCGCATCCATTACCCAAACTTGGAGGAA
CGACGTGAAATATTGGGCTCACGTCTTTGTTGCCTCATTCGTTTTCCGTACATGACATGC
AGGAAGCTGAAGAAAGTTCTAACTTGCAATGACTTTGATCCTGAACTATCTTCAAAGGTT
GTCCTGGAGGCTCTATTTTTCAAAGCTGAAGCACCATACCGGCAGCGTTCTCTTGCTGCT
GAGGAGGGCAGTGCCTCACACCATTGTTTTGTGGAGCGTGCTTACAAGTATAGACCAGTT
AAAGTTGTCGAGTTTGAACTACCTCGTCAGCAATGTATTGTTTACCTAGATACAAAACGG
GAAGAGTGCAATAGTCTCTTTCCTGCTGGCATGCAAGAGAAGGGGTCAGTGTCATTTGCA
GTGGATTATGAGTTTGCAGCTCGGACAAAGCCAACCGAGGACTATGTGAGCAAGTATAAG
GGGAACTACACATTCACCGGTGGCAAGGCTGTTGGCTACAGGAACCTGTTTGGCATCCCT
TGGACTGCTTTTATGGCTGAAGATAGTCCATACTGGACTTTTTTAGATGTCAGTGAGGGC
TTTGAGAAGAGGTGGAATGCTAACTGTAAGATGTTGTCGACCCTAGTTTCCAGAAAGGTT
TAA

Peptide Sequence

PEP ID

XP_016468861.1
PEP Infomation

PREDICTED: BTB/POZ domain-containing protein POB1-like isoform X3 [Nicotiana tabacum]
Sequence

MKNLNNDIFDPLTIIMDSDFSSGYGSGTESDFGFAFNDSNFSDRILIVEIVPDSPDSKSD
GEGCSSIVDWARKRKRRREEIKKENDADVLTQREEEMLNCNMLDTEDGLAYENQDEEAVA
MVEEYPSGLEMITDHPGDGEAPKSTDSSTNMDSSTGFRVRTIHISSPILAAKSPFFYKLF
SNGMRESEQRHVTVQIHASEEAAFMELLSFMYSNALSTITPTPLLDVLMAADKFEVASCM
RYCSRLLRNLPMTCESALLYLDLPSGVLMADAVLPLTDAAKQFLAARFKDITKFQEEVLN
LPLAGIVAVLSNDDLQVASEDAVYDFVLKWARIHYPNLEERREILGSRLCCLIRFPYMTC
RKLKKVLTCNDFDPELSSKVVLEALFFKAEAPYRQRSLAAEEGSASHHCFVERAYKYRPV
KVVEFELPRQQCIVYLDTKREECNSLFPAGMQEKGSVSFAVDYEFAARTKPTEDYVSKYK
GNYTFTGGKAVGYRNLFGIPWTAFMAEDSPYWTFLDVSEGFEKRWNANCKMLSTLVSRKV

Transcript Sequence

Gene sequence data has not been registered.